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ydaK [2017-02-27 15:02:04]
general stress protein, may act as c-di-GMP receptor, required for extracellular polysaccharide synthesis by YdaL-YdaM-YdaN
product
general stress protein
Genomic Context
categories
[category|SW 3|Information processing] → [category|SW 3.5|Targets of second messengers] → [category|SW 3.5.2|Targets of c-di-GMP][category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.1|General stress proteins (controlled by SigB)][category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]This gene is a member of the following [SW|regulons]
[SW|SigB regulon]Gene
Coordinates on the chromosome (coding sequence)
480,013 -> 480,864
The protein
[SW|Domains]
contains a C-terminal degenerated [SW|GGDEF domain] [Pubmed|23893111][SW|Cofactors]
binds c-di-GPM at high concentration (K(D) for c-di-GMP: 1.1 myM) [Pubmed|23893111][SW|Localization]
cell membrane, forms clusters at the cell poles and septa (with [protein|961538BEDD27C24FC073AFB7AB3268E3D46783CC|YdaM] and [protein|ADE0122D8FFF2F78B6D21031B7D02A323A13ED63|YdaN]) [Pubmed|27897378]Expression and Regulation
[[this]]
Biological materials
Mutant
MGNA-C074 (ydaK::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2072 NBRP B. subtilis, Japan]GP1592 (kan) available in [SW|Jörg Stülke]'s labReferences
22383849,22821967,23893111,27897378